BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D11LP1|AL427900
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig955 1897 0.0
>3x_Contig955
Length = 4159
Score = 1897 bits (951), Expect = 0.0
Identities = 979/993 (98%), Gaps = 1/993 (0%)
Strand = Plus / Minus
Query: 1 gatcataaagtggactggacagatctctcttatgatatctgcagaagcattcttgattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2914 gatcataaagtggactggacagatctctcttatgatatctgcagaagcattcttgattgc 2855
Query: 61 atctataatatatcctgtcaaaagaaatctactcaggtacttgataaaattgcattcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854 atctataatatatcctgtcaaaagaaatctactcaggtacttgataaaattgcattcaat 2795
Query: 121 atgggacatcaaaggtatcacgataggttattgcacatgcttgawatatcagataaattt 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2794 atgggacatcaaaggtatcacgataggttattgcacatgcttgaaatatcagataaattt 2735
Query: 181 atgcttttgacgttagtccaacatatagaaagccagttgatatcatcagttaattcaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2734 atgcttttgacgttagtccaacatatagaaagccagttgatatcatcagttaattcaaac 2675
Query: 241 aatgttattgctttctggattgcagctagcgaccttaatttaccggatttagccgccaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2674 aatgttattgctttctggattgcagctagcgaccttaatttaccggatttagccgccaac 2615
Query: 301 tgtcaggagtatatcttcaggaatccttctgtcttatttagctctgacaccgtagagcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2614 tgtcaggagtatatcttcaggaatccttctgtcttatttagctctgacaccgtagagcat 2555
Query: 361 atcatgcaaaacatcacatcagawatgtggaaatccattgagcaaaaatttagaacagaa 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2554 atcatgcaaaacatcacatcagaaatgtggaaatccattgagcaaaaatttagaacagaa 2495
Query: 421 ttaggcatgtgctcacaggaaagttggtattatggaccgawagcgtcagattacattcgt 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2494 ttaggcatgtgctcacaggaaagttggtattatggaccgaaagcgtcagattacattcgt 2435
Query: 481 caactggaaaagaatattgtcgctttcaattctcatttcatctcggaggaaaatccattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2434 caactggaaaagaatattgtcgctttcaattctcatttcatctcggaggaaaatccattg 2375
Query: 541 gagattttggtagactcagttatttatwawawgcatagacaaaagagtggtttagatgtt 600
||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||
Sbjct: 2374 gagattttggtagactcagttatttataaaaagcatagacaaaagagtggtttagatgta 2315
Query: 601 agggaacccagcatcagttaaactacacgaagctcatccatcaatgagaatctggtaaat 660
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314 aggaaacccagcatcagtaaaactacacgaagctcatccatcaatgagaatctggtaaat 2255
Query: 661 attagaaaaccaagcgctgtagcccagaattcgattgcttggaataagtcatataacatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2254 attagaaaaccaagcgctgtagcccagaattcgattgcttggaataagtcatataacatg 2195
Query: 721 acagattccgcaattgatgatgacgatgatcagtctacttttgttgaggtttctaagaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2194 acagattccgcaattgatgatgacgatgatcagtctacttttgttgaggtttctaagaag 2135
Query: 781 aagaaacgaagaccatccagcataacaagagctgcttcgatagatgacaaagcggcgcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2134 aagaaacgaagaccatccagcataacaagagctgcttcgatagatgacaaagcggcgcat 2075
Query: 841 gawattcataccaacatggacgggaacaggttactggttcgcaaaaatagttcagaacat 900
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 gaaattcataccaacatggacgggaacaggttactggttcgcaaaaatagttcagaacat 2015
Query: 901 tcattccctgctcttggtg-aamgactaacaagtcaaatagtaccgtcaagataaaaata 959
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 2014 tcattccctgctcttggtgaaacgactaacaagtcaaatagtaccgtcaagataaaaata 1955
Query: 960 aagaagggaactcaaaaagagaaaattwaacgg 992
||||||| ||||||||||||||||||| |||||
Sbjct: 1954 aagaaggaaactcaaaaagagaaaattaaacgg 1922
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7778
Number of Sequences: 1807
Number of extensions: 7778
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)